BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D06LP1|AL428539
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig886 824 0.0
3x_Contig1732 436 e-122
>3x_Contig886
Length = 4262
Score = 824 bits (412), Expect = 0.0
Identities = 430/442 (97%)
Strand = Plus / Plus
Query: 459 acaagactattgcaggttccaacttgaagatcccactctcatgacgagtctcatggataa 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaagactattgcaggttccaacttgaagatcccactctcatgacgagtctcatggataa 60
Query: 519 gaaaaaagactgtacattcgggcaaaaccgtttaggaaatggcaagataagagaagacca 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaaaaagactgtacattcgggcaaaaccgtttaggaaatggcaagataagagaagacca 120
Query: 579 agcacaactcttgttatgcaactaattacttcctcattctgtcttacaagtttcatgcaa 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcacaactcttgttatgcaactaattacttcctcattctgtcttacaagtttcatgcaa 180
Query: 639 gaccagttcagaatgccaaatggaaattcctgcggaaatccctgcgtaaaaaaaamaccg 698
|||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||
Sbjct: 181 gaccagttcagaatgccaaatggaaaattctgcggaaatccctgcgtaaaaaaaacaccg 240
Query: 699 ctcgagtgagtcacgtggaccgtatwtttwwtchtaaacmgctatttaamamatctccca 758
||||||||||||||||||||||||| | | || ||||| ||||||||| | ||||||||
Sbjct: 241 ctcgagtgagtcacgtggaccgtatatataatcataaaccgctatttaacacatctccca 300
Query: 759 aaaacaaggaacagaccagtgccttgctccttcgctcagctttctcaagcttcccaagca 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaacaaggaacagaccagtgccttgctccttcgctcagctttctcaagcttcccaagca 360
Query: 819 catacggcatgtcagaaggggtgcaccgccatcattcttacttgaaagtcagtcagacgt 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catacggcatgtcagaaggggtgcaccgccatcattcttacttgaaagtcagtcagacgt 420
Query: 879 taatcaaatcmtccgcagagaa 900
|||||||||| |||||||||||
Sbjct: 421 taatcaaatcatccgcagagaa 442
>3x_Contig1732
Length = 24266
Score = 436 bits (218), Expect = e-122
Identities = 252/262 (96%), Gaps = 1/262 (0%)
Strand = Plus / Plus
Query: 1 agtgaacaaatgtgtaac-agtacccagaacctttttaaacacttccgaagttatagttg 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 23506 agtgaacaaatgtgtaaccagtacccagaacctttttaaacacttccgaagttatagttg 23565
Query: 60 tggaaaagataccgatcttgaaagacctatggttcccagttcaagcaaaaccaaaaccaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23566 tggaaaagataccgatcttgaaagacctatggttcccagttcaagcaaaaccaaaaccaa 23625
Query: 120 aaaaaaaacagtggcaattgtgagtattaattataattgttactgaatggtaattttcaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23626 aaaaaaaacagtggcaattgtgagtattaattataattgttactgaatggtaattttcaa 23685
Query: 180 aactttcaaacaactttgattgggaaaaggatgtggaaaacgaaaaggtgggaaggaata 239
||||||||||||||| |||||||||||| | | |||| ||||||| |||||||||||
Sbjct: 23686 aactttcaaacaactgtgattgggaaaaccgtctccaaaaagaaaaggggggaaggaata 23745
Query: 240 agaaagaaaaaaaaaaaaaatt 261
||||||||||||||||||||||
Sbjct: 23746 agaaagaaaaaaaaaaaaaatt 23767
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,905
Number of Sequences: 1807
Number of extensions: 15905
Number of successful extensions: 522
Number of sequences better than 1.0e-20: 2
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)